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OME-TIFF
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Quantitative image inspection and presentation
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Segmentation
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Connected component labeling
Object shape measurements
Nuclei segmentation and shape measurement
Fluorescence microscopy image formation
Object intensity measurements
Global background correction
Neighborhood filters
Median filter
2D noisy object segmentation and filtering
Morphological filters
Local background correction
Object filtering
Distance transform
Watershed
Nuclei and cells segmentation
Skeletonization
Similarity transformations
Running a script
Coding with LLMs
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Deep learning instance segmentation
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Segment Golgi objects per cell
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Training Resources
: Basic Bioimage Inspection
Digital image basics
Data types
Lookup tables
Spatial calibration
Multichannel images
Volume slicing
